Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC10.6□□□□□ -0.71
LITAFQ99732 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 TSPY5P-201ENST00000426936 936 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC10.6□□□□□ -0.71
LITAFQ99732 RBSN-204ENST00000449050 903 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
LITAFQ99732 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 KRT8P26-201ENST00000534154 1276 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 AC011498.5-201ENST00000592027 486 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 AC145285.6-201ENST00000604632 637 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 AC114341.1-201ENST00000618070 349 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AP001267.2-201ENST00000532619 2086 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 WASH3P-207ENST00000560956 1394 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 FO538757.1-201ENST00000623083 1397 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LITAFQ99732 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.6□□□□□ -0.71
LITAFQ99732 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.59□□□□□ -0.71
LITAFQ99732 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LITAFQ99732 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 AC011474.4-201ENST00000623523 2076 ntBASIC10.59□□□□□ -0.71
LITAFQ99732 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 AC027612.1-201ENST00000445234 2395 ntBASIC10.59□□□□□ -0.71
LITAFQ99732 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PI4KAP1-204ENST00000612579 1703 ntBASIC10.59□□□□□ -0.71
LITAFQ99732 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms