Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LYSTQ99698 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LYSTQ99698 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.8□□□□□ -0.68
LYSTQ99698 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.8□□□□□ -0.68
LYSTQ99698 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 AC022748.3-201ENST00000621828 275 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LYSTQ99698 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 RPSAP31-201ENST00000416648 895 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 AC097065.1-201ENST00000425737 517 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 AC245100.5-201ENST00000452108 331 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 AC132192.2-201ENST00000596206 1147 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 BNIP3P1-202ENST00000550043 1585 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LYSTQ99698 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LYSTQ99698 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 TUBBP5-203ENST00000508529 1334 ntBASIC10.79□□□□□ -0.68
LYSTQ99698 CD8B2-202ENST00000417670 633 ntBASIC10.79□□□□□ -0.68
LYSTQ99698 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.79□□□□□ -0.68
LYSTQ99698 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.79□□□□□ -0.68
LYSTQ99698 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC10.79□□□□□ -0.68
LYSTQ99698 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.79□□□□□ -0.68
LYSTQ99698 MIR3147-201ENST00000577811 66 ntBASIC10.79□□□□□ -0.68
LYSTQ99698 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.79□□□□□ -0.68
LYSTQ99698 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.79□□□□□ -0.68
LYSTQ99698 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC10.79□□□□□ -0.68
LYSTQ99698 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LYSTQ99698 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LYSTQ99698 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 AC120498.9-201ENST00000339021 3867 ntBASIC10.79□□□□□ -0.68
LYSTQ99698 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LYSTQ99698 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LYSTQ99698 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.79□□□□□ -0.68
LYSTQ99698 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
LYSTQ99698 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.79□□□□□ -0.68
LYSTQ99698 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LYSTQ99698 AL121723.1-201ENST00000445194 1519 ntBASIC10.79□□□□□ -0.68
LYSTQ99698 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 AC004987.2-201ENST00000395959 1148 ntBASIC10.78□□□□□ -0.68
LYSTQ99698 AC012362.1-201ENST00000434906 739 ntBASIC10.78□□□□□ -0.68
LYSTQ99698 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.78□□□□□ -0.68
LYSTQ99698 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LYSTQ99698 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LYSTQ99698 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.78□□□□□ -0.68
LYSTQ99698 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LYSTQ99698 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.78□□□□□ -0.68
LYSTQ99698 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.78□□□□□ -0.68
LYSTQ99698 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.78□□□□□ -0.68
LYSTQ99698 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LYSTQ99698 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LYSTQ99698 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYSTQ99698 ME2P1-201ENST00000426028 1970 ntBASIC10.78□□□□□ -0.68
LYSTQ99698 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms