Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 UPF3AP3-201ENST00000420996 769 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 KRT18P32-201ENST00000424695 1287 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AC112482.1-201ENST00000492080 688 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AC092865.5-201ENST00000545435 363 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AL691432.1-201ENST00000596308 1422 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 YBX1P5-201ENST00000509441 847 ntBASIC15.15■□□□□ 0.02
BBS4Q96RK4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AC026979.3-201ENST00000607315 403 ntBASIC15.15■□□□□ 0.02
BBS4Q96RK4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AL513210.1-201ENST00000629608 234 ntBASIC15.15■□□□□ 0.02
BBS4Q96RK4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 AL365209.1-201ENST00000624418 6473 ntBASIC15.15■□□□□ 0.02
BBS4Q96RK4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS4Q96RK4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BBS4Q96RK4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 MYO15B-237ENST00000642007 4893 ntBASIC15.14■□□□□ 0.01
BBS4Q96RK4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 RPSAP43-201ENST00000402237 625 ntBASIC15.14■□□□□ 0.01
BBS4Q96RK4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 AL139010.1-201ENST00000454878 894 ntBASIC15.14■□□□□ 0.01
BBS4Q96RK4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 RARRES2P9-201ENST00000565168 469 ntBASIC15.14■□□□□ 0.01
BBS4Q96RK4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms