Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC106881.1-201ENST00000605849 3329 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 UPF3AP3-201ENST00000420996 769 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC092474.2-201ENST00000424288 719 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC002347.1-201ENST00000569543 541 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC023141.13-201ENST00000604991 943 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC064836.3-201ENST00000607928 673 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 AL078644.1-201ENST00000609881 752 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC010507.1-201ENST00000633895 436 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC008677.1-201ENST00000519230 1561 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
SNX18Q96RF0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SNX18Q96RF0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SNX18Q96RF0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.58□□□□□ -0.07
SNX18Q96RF0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SNX18Q96RF0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
SNX18Q96RF0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SNX18Q96RF0 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.58□□□□□ -0.07
SNX18Q96RF0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.58□□□□□ -0.07
SNX18Q96RF0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 YBX2P1-201ENST00000394192 760 ntBASIC14.58□□□□□ -0.08
SNX18Q96RF0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 GPX1P2-201ENST00000429271 606 ntBASIC14.58□□□□□ -0.08
SNX18Q96RF0 AC140658.5-201ENST00000438532 169 ntBASIC14.58□□□□□ -0.08
SNX18Q96RF0 DNAJB3-201ENST00000446806 729 ntBASIC14.58□□□□□ -0.08
SNX18Q96RF0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.58□□□□□ -0.08
SNX18Q96RF0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SNX18Q96RF0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AC010491.1-201ENST00000563101 2797 ntBASIC14.57□□□□□ -0.08
SNX18Q96RF0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms