Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPRD1AQ96P16 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPRD1AQ96P16 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPRD1AQ96P16 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 MIR661-201ENST00000384842 89 ntBASIC16.39■□□□□ 0.21
RPRD1AQ96P16 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 AC002472.2-201ENST00000442739 958 ntBASIC16.39■□□□□ 0.21
RPRD1AQ96P16 FAM207CP-201ENST00000443486 507 ntBASIC16.39■□□□□ 0.21
RPRD1AQ96P16 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 SERBP1P5-201ENST00000510079 1181 ntBASIC16.39■□□□□ 0.21
RPRD1AQ96P16 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RPRD1AQ96P16 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 FLJ16779-201ENST00000612722 7638 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC114501.2-201ENST00000439631 535 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC104794.3-201ENST00000566840 1248 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 MIR3197-201ENST00000582241 73 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC008761.3-201ENST00000624803 892 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC004461.2-201ENST00000629517 803 ntBASIC16.38■□□□□ 0.21
RPRD1AQ96P16 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPRD1AQ96P16 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
RPRD1AQ96P16 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RPRD1AQ96P16 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.37■□□□□ 0.21
RPRD1AQ96P16 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms