Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 CYP4F24P-201ENST00000586049 1580 ntBASIC12.97□□□□□ -0.33
ZNF48Q96MX3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC098850.1-201ENST00000419919 790 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 HIST3H2BA-201ENST00000436555 524 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 MYCLP2-201ENST00000449268 967 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 ELK1P1-201ENST00000485699 580 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC011495.1-201ENST00000498085 584 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC123567.1-201ENST00000548294 1261 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 CTBP2P3-201ENST00000585629 1255 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC025048.3-201ENST00000590609 569 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 MIR4321-201ENST00000592276 80 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC005702.4-201ENST00000618393 416 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 MIR6752-201ENST00000618442 71 ntBASIC12.96□□□□□ -0.33
ZNF48Q96MX3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF48Q96MX3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF48Q96MX3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF48Q96MX3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF48Q96MX3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF48Q96MX3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms