Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AL671277.1-201ENST00000429656 993 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 CNN2P2-201ENST00000443536 909 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 CNN2P3-201ENST00000450201 906 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AL512356.2-201ENST00000546955 174 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AC190387.1-201ENST00000551683 408 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AL136317.3-201ENST00000618497 906 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AC138035.3-201ENST00000622706 2791 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.41■□□□□ 0.22
GRAMD1AQ96CP6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AC136621.1-201ENST00000624017 2304 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AL355306.1-201ENST00000415580 579 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 SPDYE11-202ENST00000450699 704 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AC109322.1-201ENST00000524499 1264 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 SPDYE9P-201ENST00000570642 692 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 SPDYE10P-202ENST00000612005 668 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 SPDYE8P-202ENST00000612377 668 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AC007292.2-201ENST00000593524 1812 ntBASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
GRAMD1AQ96CP6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GRAMD1AQ96CP6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.39■□□□□ 0.22
GRAMD1AQ96CP6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GRAMD1AQ96CP6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GRAMD1AQ96CP6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms