Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AC068137.2-201ENST00000605408 478 ntBASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 AC013726.1-201ENST00000563747 2285 ntBASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 MRPL3P1-201ENST00000400109 1033 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 RPS8P6-201ENST00000426177 609 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AC105233.2-201ENST00000523697 349 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AF228730.5-201ENST00000530288 346 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AP002472.1-201ENST00000577490 586 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC44A1Q8WWI5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms