Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 AC129492.6-201ENST00000611383 1305 ntBASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD2Q8NHY2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 KRT8P44-201ENST00000441609 1350 ntBASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD2Q8NHY2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC012569.1-201ENST00000591191 1524 ntBASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 RBM17P3-201ENST00000417687 1192 ntBASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC026396.1-201ENST00000419388 421 ntBASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 MTDHP4-201ENST00000600287 670 ntBASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms