Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 AL645728.2-202ENST00000641679 227 ntBASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
COL22A1Q8NFW1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 HLA-J-204ENST00000495278 958 ntBASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 MEG3_2.1-201ENST00000611456 105 ntBASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL22A1Q8NFW1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 PPOX-204ENST00000462866 473 ntTSL 5 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 AC004066.1-201ENST00000502488 802 ntBASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 MIR4649-201ENST00000582839 64 ntBASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL22A1Q8NFW1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 VDAC1P1-201ENST00000439229 848 ntBASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 RN7SL67P-201ENST00000492147 296 ntBASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 RN7SL163P-201ENST00000583100 276 ntBASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 AC004466.1-201ENST00000599515 1080 ntBASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 CYP51A1P3-201ENST00000400072 1428 ntBASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.62■□□□□ 0.89
COL22A1Q8NFW1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AC010141.1-201ENST00000411585 623 ntBASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AL139008.1-201ENST00000437894 228 ntBASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 RBM8B-201ENST00000555532 525 ntBASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 MIR3677-201ENST00000578964 60 ntBASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 MIR4683-201ENST00000579659 81 ntBASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 AP000593.2-201ENST00000542775 1433 ntBASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms