Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 AC005252.3-201ENST00000623855 2258 ntBASIC11.96□□□□□ -0.49
NUP35Q8NFH5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
NUP35Q8NFH5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 RCN1P2-201ENST00000398357 915 ntBASIC11.95□□□□□ -0.5
NUP35Q8NFH5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AC064862.7-201ENST00000604520 867 ntBASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AC145285.6-201ENST00000604632 637 ntBASIC11.95□□□□□ -0.5
NUP35Q8NFH5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AC023024.2-201ENST00000623561 1993 ntBASIC11.95□□□□□ -0.5
NUP35Q8NFH5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 BEND3P1-201ENST00000421591 1944 ntBASIC11.95□□□□□ -0.5
NUP35Q8NFH5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NUP35Q8NFH5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms