Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PIK3C3Q8NEB9 LINC01101-201ENST00000622953 1884 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PCDHA3-202ENST00000532566 4594 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PRSS29P-201ENST00000440800 595 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 IGHV3-22-201ENST00000520721 359 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 UNC93B6-202ENST00000528242 690 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 MIR4751-201ENST00000578027 74 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 AL031055.1-201ENST00000606362 631 ntBASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIK3C3Q8NEB9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 AC106881.1-201ENST00000605849 3329 ntBASIC15□□□□□ -0.01
PIK3C3Q8NEB9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 HAUS4P1-201ENST00000406739 1145 ntBASIC15□□□□□ -0.01
PIK3C3Q8NEB9 PMS2P4-201ENST00000412466 1052 ntBASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 RNA5SP415-201ENST00000517246 115 ntBASIC15□□□□□ -0.01
PIK3C3Q8NEB9 CD63-204ENST00000546939 779 ntTSL 3 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 AC004790.2-201ENST00000623588 572 ntBASIC15□□□□□ -0.01
PIK3C3Q8NEB9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIK3C3Q8NEB9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms