Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.75■□□□□ 0.27
SCUBE3Q8IX30 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 AC005034.1-201ENST00000426657 489 ntBASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 SERBP1P3-201ENST00000459980 809 ntBASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 AC093214.1-201ENST00000511688 1107 ntBASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MIR4313-201ENST00000580760 101 ntBASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 CICP13-201ENST00000422015 2789 ntBASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCUBE3Q8IX30 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AC010336.2-201ENST00000564226 506 ntBASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AL844908.2-201ENST00000609461 460 ntBASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AF228730.6-201ENST00000641497 218 ntBASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AC084121.3-201ENST00000641716 218 ntBASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AC105233.6-201ENST00000642093 218 ntBASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCUBE3Q8IX30 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms