Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC087499.5-201ENST00000452760 1342 ntBASIC15.29■□□□□ 0.04
RAB43Q86YS6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 MRPS18AP1-201ENST00000414458 589 ntBASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC026979.3-201ENST00000607315 403 ntBASIC15.29■□□□□ 0.04
RAB43Q86YS6 TEX28P1-201ENST00000613479 1221 ntBASIC15.29■□□□□ 0.04
RAB43Q86YS6 TEX28P2-201ENST00000617764 1221 ntBASIC15.29■□□□□ 0.04
RAB43Q86YS6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB43Q86YS6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 AC144831.1-201ENST00000573312 2656 ntBASIC15.29■□□□□ 0.04
RAB43Q86YS6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB43Q86YS6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AL365203.3-201ENST00000609742 2057 ntBASIC15.28■□□□□ 0.04
RAB43Q86YS6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AC244107.1-201ENST00000442033 332 ntBASIC15.28■□□□□ 0.04
RAB43Q86YS6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms