Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHD1LQ86WJ1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHD1LQ86WJ1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CHD1LQ86WJ1 TSPY26P-202ENST00000565928 3884 ntBASIC19.64■□□□□ 0.74
CHD1LQ86WJ1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.64■□□□□ 0.74
CHD1LQ86WJ1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 AC136604.1-201ENST00000418535 575 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 UPF3AP3-201ENST00000420996 769 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 AC026150.2-201ENST00000564693 1156 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 MIR3687-2-201ENST00000577708 61 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 AC004835.2-201ENST00000603762 682 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 AL133215.2-201ENST00000609242 977 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 MIR3687-1-201ENST00000614492 61 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 AL607033.1-201ENST00000623900 1599 ntBASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD1LQ86WJ1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 HIST3H2BA-201ENST00000436555 524 ntBASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 AC009093.7-201ENST00000623853 1223 ntBASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD1LQ86WJ1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 SPDYE17-201ENST00000412399 783 ntBASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 AC023824.1-201ENST00000562945 2975 ntBASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.62■□□□□ 0.73
CHD1LQ86WJ1 AC003101.2-201ENST00000612557 442 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms