Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AC126365.1-201ENST00000578585 1514 ntBASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 TERF1P1-201ENST00000311003 1181 ntBASIC13.31□□□□□ -0.28
ZNF546Q86UE3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AC246785.2-201ENST00000432512 513 ntBASIC13.31□□□□□ -0.28
ZNF546Q86UE3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 CICP20-201ENST00000443330 2801 ntBASIC13.31□□□□□ -0.28
ZNF546Q86UE3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF546Q86UE3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 AC009090.5-201ENST00000624886 2285 ntBASIC13.3□□□□□ -0.28
ZNF546Q86UE3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 AL645929.1-201ENST00000420084 975 ntBASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TSPY22P-201ENST00000427496 604 ntBASIC13.3□□□□□ -0.28
ZNF546Q86UE3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 IGHV3-41-201ENST00000613121 348 ntBASIC13.3□□□□□ -0.28
ZNF546Q86UE3 HYMAI.1-201ENST00000620949 238 ntBASIC13.3□□□□□ -0.28
ZNF546Q86UE3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 KRT8P44-201ENST00000441609 1350 ntBASIC13.3□□□□□ -0.28
ZNF546Q86UE3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms