Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 AC093724.1-201ENST00000448659 1027 ntBASIC14.46□□□□□ -0.09
SHFQ7M4L6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 AC148477.8-201ENST00000624298 468 ntBASIC14.46□□□□□ -0.09
SHFQ7M4L6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SHFQ7M4L6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHFQ7M4L6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHFQ7M4L6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SHFQ7M4L6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SHFQ7M4L6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHFQ7M4L6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SHFQ7M4L6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHFQ7M4L6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHFQ7M4L6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHFQ7M4L6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.46□□□□□ -0.1
SHFQ7M4L6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 AL031284.1-201ENST00000419297 478 ntBASIC14.45□□□□□ -0.1
SHFQ7M4L6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 KRT18P34-201ENST00000488218 1270 ntBASIC14.45□□□□□ -0.1
SHFQ7M4L6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 AP002469.2-201ENST00000531724 424 ntBASIC14.45□□□□□ -0.1
SHFQ7M4L6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 AC134407.2-201ENST00000625089 1978 ntBASIC14.45□□□□□ -0.1
SHFQ7M4L6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 C18orf15-201ENST00000623680 2534 ntBASIC14.45□□□□□ -0.1
SHFQ7M4L6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SHFQ7M4L6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHFQ7M4L6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms