Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 AC122714.2-201ENST00000502787 707 ntBASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 ZNF444P1-201ENST00000559497 298 ntBASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 AL023973.1-201ENST00000624619 620 ntBASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 AJ011931.1-201ENST00000618749 2492 ntBASIC12.42□□□□□ -0.42
KCNIP4Q6PIL6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 GCSHP2-201ENST00000560971 527 ntBASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 AL136038.4-201ENST00000603606 1261 ntBASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
KCNIP4Q6PIL6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AC009090.5-201ENST00000624886 2285 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 C18orf15-201ENST00000623680 2534 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms