Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 AL353705.2-201ENST00000428243 662 ntBASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 AC026979.3-201ENST00000607315 403 ntBASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 AC003101.2-201ENST00000612557 442 ntBASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 AC004987.2-201ENST00000395959 1148 ntBASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HERC4Q5GLZ8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SERBP1P5-201ENST00000510079 1181 ntBASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC4Q5GLZ8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms