Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.21□□□□□ -0.13
GFRA1P56159 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
GFRA1P56159 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GFRA1P56159 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GFRA1P56159 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.21□□□□□ -0.13
GFRA1P56159 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.21□□□□□ -0.13
GFRA1P56159 AL596325.1-201ENST00000563991 1082 ntBASIC14.21□□□□□ -0.13
GFRA1P56159 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.21□□□□□ -0.13
GFRA1P56159 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.21□□□□□ -0.13
GFRA1P56159 AC012645.4-201ENST00000610691 1061 ntBASIC14.21□□□□□ -0.13
GFRA1P56159 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.21□□□□□ -0.13
GFRA1P56159 AC007431.3-201ENST00000623221 587 ntBASIC14.21□□□□□ -0.13
GFRA1P56159 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
GFRA1P56159 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.21□□□□□ -0.13
GFRA1P56159 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GFRA1P56159 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GFRA1P56159 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GFRA1P56159 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
GFRA1P56159 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GFRA1P56159 AC046158.3-201ENST00000624947 2558 ntBASIC14.21□□□□□ -0.14
GFRA1P56159 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GFRA1P56159 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.21□□□□□ -0.14
GFRA1P56159 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GFRA1P56159 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GFRA1P56159 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 AC010491.1-201ENST00000563101 2797 ntBASIC14.2□□□□□ -0.14
GFRA1P56159 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.2□□□□□ -0.14
GFRA1P56159 RN7SL692P-201ENST00000464677 288 ntBASIC14.2□□□□□ -0.14
GFRA1P56159 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GFRA1P56159 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.2□□□□□ -0.14
GFRA1P56159 AC123567.1-201ENST00000548294 1261 ntBASIC14.2□□□□□ -0.14
GFRA1P56159 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
GFRA1P56159 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 AC008494.3-201ENST00000606615 944 ntBASIC14.2□□□□□ -0.14
GFRA1P56159 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.2□□□□□ -0.14
GFRA1P56159 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GFRA1P56159 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.2□□□□□ -0.14
GFRA1P56159 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 AC026691.1-201ENST00000602502 2017 ntBASIC14.2□□□□□ -0.14
GFRA1P56159 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GFRA1P56159 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFRA1P56159 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.2□□□□□ -0.14
GFRA1P56159 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GFRA1P56159 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.19□□□□□ -0.14
GFRA1P56159 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.19□□□□□ -0.14
GFRA1P56159 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.19□□□□□ -0.14
GFRA1P56159 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 DGCR5-201ENST00000399539 862 ntBASIC14.19□□□□□ -0.14
GFRA1P56159 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms