Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 AMT-224ENST00000635808 1610 ntTSL 5 BASIC22.31■■□□□ 1.16
CLTCL1P53675 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC22.31■■□□□ 1.16
CLTCL1P53675 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.31■■□□□ 1.16
CLTCL1P53675 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 AC009090.5-201ENST00000624886 2285 ntBASIC22.31■■□□□ 1.16
CLTCL1P53675 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC22.31■■□□□ 1.16
CLTCL1P53675 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 AL139094.1-201ENST00000405549 1188 ntBASIC22.31■■□□□ 1.16
CLTCL1P53675 POM121L8P-201ENST00000417732 1281 ntBASIC22.31■■□□□ 1.16
CLTCL1P53675 POM121L9P-203ENST00000441984 1285 ntBASIC22.31■■□□□ 1.16
CLTCL1P53675 AL591846.1-201ENST00000451736 433 ntBASIC22.31■■□□□ 1.16
CLTCL1P53675 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLTCL1P53675 AC073413.1-201ENST00000603927 732 ntBASIC22.31■■□□□ 1.16
CLTCL1P53675 ETV2-208ENST00000621247 941 ntTSL 5 BASIC22.31■■□□□ 1.16
CLTCL1P53675 AC006449.5-201ENST00000610658 2098 ntBASIC22.3■■□□□ 1.16
CLTCL1P53675 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
CLTCL1P53675 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CLTCL1P53675 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC22.3■■□□□ 1.16
CLTCL1P53675 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC22.3■■□□□ 1.16
CLTCL1P53675 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CLTCL1P53675 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC22.3■■□□□ 1.16
CLTCL1P53675 AC104306.2-201ENST00000451877 341 ntBASIC22.3■■□□□ 1.16
CLTCL1P53675 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC22.3■■□□□ 1.16
CLTCL1P53675 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC22.3■■□□□ 1.16
CLTCL1P53675 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC22.3■■□□□ 1.16
CLTCL1P53675 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.3■■□□□ 1.16
CLTCL1P53675 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC22.3■■□□□ 1.16
CLTCL1P53675 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC22.3■■□□□ 1.16
CLTCL1P53675 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC22.3■■□□□ 1.16
CLTCL1P53675 AL158070.2-201ENST00000623713 1621 ntBASIC22.3■■□□□ 1.16
CLTCL1P53675 AL354989.2-201ENST00000435838 1540 ntBASIC22.3■■□□□ 1.16
CLTCL1P53675 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CLTCL1P53675 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CLTCL1P53675 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLTCL1P53675 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 AC104457.1-201ENST00000401024 814 ntBASIC22.29■■□□□ 1.16
CLTCL1P53675 PFN2-205ENST00000461868 613 ntTSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 RNA5SP486-201ENST00000515961 83 ntBASIC22.29■■□□□ 1.16
CLTCL1P53675 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC22.29■■□□□ 1.16
CLTCL1P53675 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC22.29■■□□□ 1.16
CLTCL1P53675 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC22.29■■□□□ 1.16
CLTCL1P53675 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC22.29■■□□□ 1.16
CLTCL1P53675 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLTCL1P53675 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLTCL1P53675 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CLTCL1P53675 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
CLTCL1P53675 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC22.29■■□□□ 1.16
CLTCL1P53675 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLTCL1P53675 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.28■■□□□ 1.16
CLTCL1P53675 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 AGER-203ENST00000375065 665 ntTSL 2 BASIC22.28■■□□□ 1.16
CLTCL1P53675 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC22.28■■□□□ 1.16
CLTCL1P53675 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC22.28■■□□□ 1.16
CLTCL1P53675 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 AHCYP2-201ENST00000430630 1300 ntBASIC22.28■■□□□ 1.16
CLTCL1P53675 GRN-222ENST00000639447 1314 ntTSL 2 BASIC22.28■■□□□ 1.16
CLTCL1P53675 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 CYP2T1P-202ENST00000641596 2535 ntBASIC22.28■■□□□ 1.16
CLTCL1P53675 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 AC091804.1-201ENST00000486888 567 ntBASIC22.28■■□□□ 1.16
CLTCL1P53675 AC106820.3-201ENST00000561653 397 ntBASIC22.28■■□□□ 1.16
CLTCL1P53675 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms