Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
USP11P51784 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.92■□□□□ 0.46
USP11P51784 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP11P51784 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 KRT18P64-201ENST00000434946 1219 ntBASIC17.92■□□□□ 0.46
USP11P51784 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 AL589987.1-201ENST00000453380 819 ntBASIC17.92■□□□□ 0.46
USP11P51784 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.92■□□□□ 0.46
USP11P51784 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 AC004790.1-201ENST00000612686 536 ntBASIC17.92■□□□□ 0.46
USP11P51784 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 AC138969.3-201ENST00000546612 1459 ntBASIC17.92■□□□□ 0.46
USP11P51784 AC138932.2-201ENST00000548268 1459 ntBASIC17.92■□□□□ 0.46
USP11P51784 AC126755.4-201ENST00000549796 1459 ntBASIC17.92■□□□□ 0.46
USP11P51784 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.92■□□□□ 0.46
USP11P51784 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
USP11P51784 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.91■□□□□ 0.46
USP11P51784 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.91■□□□□ 0.46
USP11P51784 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.91■□□□□ 0.46
USP11P51784 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.91■□□□□ 0.46
USP11P51784 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.91■□□□□ 0.46
USP11P51784 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 SPDYE19P-201ENST00000338590 713 ntBASIC17.91■□□□□ 0.46
USP11P51784 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 MEP1AP4-201ENST00000423244 1087 ntBASIC17.91■□□□□ 0.46
USP11P51784 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.91■□□□□ 0.46
USP11P51784 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 TERF1P3-201ENST00000505638 1227 ntBASIC17.91■□□□□ 0.46
USP11P51784 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.91■□□□□ 0.46
USP11P51784 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
USP11P51784 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.91■□□□□ 0.46
USP11P51784 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP11P51784 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
USP11P51784 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.91■□□□□ 0.46
USP11P51784 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.91■□□□□ 0.46
USP11P51784 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.91■□□□□ 0.46
USP11P51784 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.91■□□□□ 0.46
USP11P51784 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.91■□□□□ 0.46
USP11P51784 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP11P51784 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP11P51784 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.9■□□□□ 0.46
USP11P51784 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
USP11P51784 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 GNAQP1-201ENST00000444815 1067 ntBASIC17.9■□□□□ 0.46
USP11P51784 AC093004.1-201ENST00000508850 424 ntBASIC17.9■□□□□ 0.46
USP11P51784 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.9■□□□□ 0.46
USP11P51784 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.9■□□□□ 0.46
USP11P51784 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms