Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM4SF4P48230 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TM4SF4P48230 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF4P48230 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF4P48230 AC018892.3-201ENST00000623986 2499 ntBASIC17.78■□□□□ 0.44
TM4SF4P48230 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF4P48230 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TM4SF4P48230 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TM4SF4P48230 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF4P48230 FGFR3P1-201ENST00000449999 601 ntBASIC17.78■□□□□ 0.44
TM4SF4P48230 TUBB8P8-201ENST00000458717 1058 ntBASIC17.78■□□□□ 0.44
TM4SF4P48230 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.78■□□□□ 0.44
TM4SF4P48230 AC135983.4-201ENST00000564116 1262 ntBASIC17.78■□□□□ 0.44
TM4SF4P48230 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.78■□□□□ 0.44
TM4SF4P48230 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TM4SF4P48230 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TM4SF4P48230 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF4P48230 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TM4SF4P48230 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TM4SF4P48230 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF4P48230 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TM4SF4P48230 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.77■□□□□ 0.44
TM4SF4P48230 AL627389.1-201ENST00000413508 1182 ntBASIC17.77■□□□□ 0.44
TM4SF4P48230 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.77■□□□□ 0.44
TM4SF4P48230 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.77■□□□□ 0.44
TM4SF4P48230 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.77■□□□□ 0.44
TM4SF4P48230 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF4P48230 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF4P48230 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.77■□□□□ 0.43
TM4SF4P48230 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF4P48230 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF4P48230 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.77■□□□□ 0.43
TM4SF4P48230 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF4P48230 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.77■□□□□ 0.43
TM4SF4P48230 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF4P48230 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TM4SF4P48230 AC004899.1-201ENST00000424687 1714 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 AL136309.1-201ENST00000403917 691 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.76■□□□□ 0.43
TM4SF4P48230 PDIA3P2-201ENST00000428073 158 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.76■□□□□ 0.43
TM4SF4P48230 KRT18P66-201ENST00000452970 1269 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 AC125604.1-201ENST00000496255 707 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 AC106820.3-201ENST00000561653 397 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 AC005324.6-201ENST00000587972 613 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 AC012044.1-201ENST00000603431 297 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 AC087045.2-201ENST00000606279 1003 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 AC025181.2-201ENST00000606994 802 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 AC068587.8-201ENST00000641239 219 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF4P48230 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF4P48230 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF4P48230 AC020763.4-201ENST00000623414 4170 ntBASIC17.76■□□□□ 0.43
TM4SF4P48230 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TM4SF4P48230 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.75■□□□□ 0.43
TM4SF4P48230 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms