Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.04■□□□□ 0.32
SSR1P43307 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 PID1-202ENST00000392054 2745 ntTSL 2 BASIC17.04■□□□□ 0.32
SSR1P43307 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SSR1P43307 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.04■□□□□ 0.32
SSR1P43307 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SSR1P43307 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.04■□□□□ 0.32
SSR1P43307 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SSR1P43307 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SSR1P43307 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SSR1P43307 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
SSR1P43307 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSR1P43307 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.03■□□□□ 0.32
SSR1P43307 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 AL589702.1-201ENST00000641229 1509 ntBASIC17.03■□□□□ 0.32
SSR1P43307 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.03■□□□□ 0.32
SSR1P43307 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SSR1P43307 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.03■□□□□ 0.32
SSR1P43307 AL365330.1-201ENST00000607459 531 ntBASIC17.03■□□□□ 0.32
SSR1P43307 FAM197Y3-203ENST00000618346 717 ntBASIC17.03■□□□□ 0.32
SSR1P43307 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSR1P43307 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.03■□□□□ 0.32
SSR1P43307 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 CICP14-201ENST00000629111 2732 ntBASIC17.02■□□□□ 0.32
SSR1P43307 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.02■□□□□ 0.32
SSR1P43307 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSR1P43307 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.02■□□□□ 0.32
SSR1P43307 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.02■□□□□ 0.32
SSR1P43307 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms