Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AP001094.4-201ENST00000579008 2176 ntBASIC19.79■□□□□ 0.76
RFC4P35249 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.79■□□□□ 0.76
RFC4P35249 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.79■□□□□ 0.76
RFC4P35249 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC4P35249 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC4P35249 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.79■□□□□ 0.76
RFC4P35249 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFC4P35249 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC4P35249 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.79■□□□□ 0.76
RFC4P35249 AC016629.1-201ENST00000596579 586 ntBASIC19.79■□□□□ 0.76
RFC4P35249 AC015967.2-201ENST00000624092 234 ntBASIC19.79■□□□□ 0.76
RFC4P35249 AC006435.4-201ENST00000625037 234 ntBASIC19.79■□□□□ 0.76
RFC4P35249 AL356737.1-201ENST00000634391 234 ntBASIC19.79■□□□□ 0.76
RFC4P35249 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 AC005052.1-201ENST00000625181 2492 ntBASIC19.79■□□□□ 0.76
RFC4P35249 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC4P35249 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.79■□□□□ 0.76
RFC4P35249 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFC4P35249 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RFC4P35249 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.78■□□□□ 0.76
RFC4P35249 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.78■□□□□ 0.76
RFC4P35249 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.78■□□□□ 0.76
RFC4P35249 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFC4P35249 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 AL096828.3-201ENST00000615354 462 ntBASIC19.78■□□□□ 0.76
RFC4P35249 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.78■□□□□ 0.76
RFC4P35249 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.78■□□□□ 0.76
RFC4P35249 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC4P35249 AL138799.1-201ENST00000448213 1675 ntBASIC19.78■□□□□ 0.76
RFC4P35249 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFC4P35249 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
RFC4P35249 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RFC4P35249 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.77■□□□□ 0.76
RFC4P35249 MIR663B-201ENST00000408361 115 ntBASIC19.77■□□□□ 0.76
RFC4P35249 CD8B2-202ENST00000417670 633 ntBASIC19.77■□□□□ 0.76
RFC4P35249 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.77■□□□□ 0.76
RFC4P35249 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.77■□□□□ 0.76
RFC4P35249 HIST2H2BC-201ENST00000498492 580 ntBASIC19.77■□□□□ 0.76
RFC4P35249 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.77■□□□□ 0.76
RFC4P35249 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.77■□□□□ 0.76
RFC4P35249 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.77■□□□□ 0.76
RFC4P35249 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.77■□□□□ 0.76
RFC4P35249 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.77■□□□□ 0.76
RFC4P35249 BX539320.1-201ENST00000623759 877 ntBASIC19.77■□□□□ 0.76
RFC4P35249 OR6D1P-203ENST00000641209 4860 ntBASIC19.77■□□□□ 0.76
RFC4P35249 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.77■□□□□ 0.76
RFC4P35249 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC4P35249 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC4P35249 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.77■□□□□ 0.75
RFC4P35249 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
RFC4P35249 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFC4P35249 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.76■□□□□ 0.75
RFC4P35249 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms