Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.13■□□□□ 0.97
USP6P35125 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
USP6P35125 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
USP6P35125 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.13■□□□□ 0.97
USP6P35125 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
USP6P35125 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
USP6P35125 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
USP6P35125 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.13■□□□□ 0.97
USP6P35125 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6P35125 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 RPS3-201ENST00000278572 907 ntTSL 3 BASIC21.12■□□□□ 0.97
USP6P35125 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC21.12■□□□□ 0.97
USP6P35125 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC21.12■□□□□ 0.97
USP6P35125 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.12■□□□□ 0.97
USP6P35125 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 RNF165-205ENST00000588679 2904 ntBASIC21.12■□□□□ 0.97
USP6P35125 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC21.12■□□□□ 0.97
USP6P35125 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
USP6P35125 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
USP6P35125 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 AC104306.2-201ENST00000451877 341 ntBASIC21.12■□□□□ 0.97
USP6P35125 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.12■□□□□ 0.97
USP6P35125 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6P35125 RN7SL48P-201ENST00000579283 293 ntBASIC21.12■□□□□ 0.97
USP6P35125 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6P35125 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.12■□□□□ 0.97
USP6P35125 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USP6P35125 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6P35125 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.11■□□□□ 0.97
USP6P35125 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.11■□□□□ 0.97
USP6P35125 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
USP6P35125 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
USP6P35125 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
USP6P35125 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 AP006547.1-201ENST00000563435 692 ntBASIC21.11■□□□□ 0.97
USP6P35125 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6P35125 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6P35125 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
USP6P35125 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USP6P35125 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6P35125 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 GRN-222ENST00000639447 1314 ntTSL 2 BASIC21.1■□□□□ 0.97
USP6P35125 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.1■□□□□ 0.97
USP6P35125 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
USP6P35125 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.1■□□□□ 0.97
USP6P35125 OARD1-212ENST00000482515 832 ntTSL 2 BASIC21.1■□□□□ 0.97
USP6P35125 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.1■□□□□ 0.97
USP6P35125 CYGB-203ENST00000589145 788 ntTSL 3 BASIC21.1■□□□□ 0.97
USP6P35125 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6P35125 AL096828.3-201ENST00000615354 462 ntBASIC21.1■□□□□ 0.97
USP6P35125 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms