Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN6P29350 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
PTPN6P29350 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN6P29350 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 AL691432.1-201ENST00000596308 1422 ntBASIC15.14■□□□□ 0.01
PTPN6P29350 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN6P29350 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 BNIP3P1-202ENST00000550043 1585 ntBASIC15.13■□□□□ 0.01
PTPN6P29350 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
PTPN6P29350 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 MIR4313-201ENST00000580760 101 ntBASIC15.13■□□□□ 0.01
PTPN6P29350 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 AC004835.2-201ENST00000603762 682 ntBASIC15.13■□□□□ 0.01
PTPN6P29350 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PTPN6P29350 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
PTPN6P29350 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN6P29350 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN6P29350 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN6P29350 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 C18orf15-201ENST00000623680 2534 ntBASIC15.12■□□□□ 0.01
PTPN6P29350 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN6P29350 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN6P29350 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms