Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 HIST3H2BA-201ENST00000436555 524 ntBASIC16.23■□□□□ 0.19
PTPN3P26045 MTND6P24-201ENST00000440466 518 ntBASIC16.23■□□□□ 0.19
PTPN3P26045 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.23■□□□□ 0.19
PTPN3P26045 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PTPN3P26045 AC069262.1-201ENST00000539058 672 ntBASIC16.23■□□□□ 0.19
PTPN3P26045 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN3P26045 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN3P26045 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.23■□□□□ 0.19
PTPN3P26045 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.23■□□□□ 0.19
PTPN3P26045 AC126177.1-201ENST00000547829 2218 ntBASIC16.23■□□□□ 0.19
PTPN3P26045 HYMAI-201ENST00000635591 3347 ntBASIC16.23■□□□□ 0.19
PTPN3P26045 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN3P26045 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN3P26045 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTPN3P26045 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 AC104640.1-201ENST00000562617 2109 ntBASIC16.22■□□□□ 0.19
PTPN3P26045 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 AC022532.1-201ENST00000624563 1728 ntBASIC16.22■□□□□ 0.19
PTPN3P26045 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTPN3P26045 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTPN3P26045 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN3P26045 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN3P26045 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN3P26045 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTPN3P26045 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PTPN3P26045 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.22■□□□□ 0.19
PTPN3P26045 AC009090.5-201ENST00000624886 2285 ntBASIC16.22■□□□□ 0.19
PTPN3P26045 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN3P26045 AC013268.4-201ENST00000637413 2228 ntBASIC16.22■□□□□ 0.19
PTPN3P26045 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN3P26045 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN3P26045 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 AC090616.6-203ENST00000579186 1945 ntBASIC16.21■□□□□ 0.19
PTPN3P26045 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN3P26045 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN3P26045 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PTPN3P26045 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN3P26045 TSEN15P1-201ENST00000423257 515 ntBASIC16.21■□□□□ 0.19
PTPN3P26045 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms