Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.04□□□□□ -0.16
ATF1P18846 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATF1P18846 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATF1P18846 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 AGAP7P-201ENST00000582299 2062 ntBASIC14.03□□□□□ -0.16
ATF1P18846 AGAP14-201ENST00000624701 2060 ntBASIC14.03□□□□□ -0.16
ATF1P18846 LINC00528-201ENST00000600723 2160 ntBASIC14.03□□□□□ -0.16
ATF1P18846 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 RNA5SP415-201ENST00000517246 115 ntBASIC14.03□□□□□ -0.16
ATF1P18846 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 AC109635.5-201ENST00000533593 962 ntBASIC14.03□□□□□ -0.16
ATF1P18846 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.03□□□□□ -0.16
ATF1P18846 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.03□□□□□ -0.16
ATF1P18846 AC104692.2-201ENST00000603054 253 ntBASIC14.03□□□□□ -0.16
ATF1P18846 AL009183.1-201ENST00000603760 355 ntBASIC14.03□□□□□ -0.16
ATF1P18846 AC007064.4-201ENST00000637740 555 ntBASIC14.03□□□□□ -0.16
ATF1P18846 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.03□□□□□ -0.16
ATF1P18846 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 AC013726.1-201ENST00000563747 2285 ntBASIC14.03□□□□□ -0.16
ATF1P18846 AC009090.5-201ENST00000624886 2285 ntBASIC14.03□□□□□ -0.16
ATF1P18846 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
ATF1P18846 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATF1P18846 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
ATF1P18846 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 AC007686.3-201ENST00000619017 3487 ntBASIC14.02□□□□□ -0.16
ATF1P18846 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.02□□□□□ -0.16
ATF1P18846 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.02□□□□□ -0.16
ATF1P18846 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.02□□□□□ -0.16
ATF1P18846 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.02□□□□□ -0.16
ATF1P18846 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATF1P18846 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ATF1P18846 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATF1P18846 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.02□□□□□ -0.17
ATF1P18846 RHOQP3-201ENST00000437982 621 ntBASIC14.02□□□□□ -0.17
ATF1P18846 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.02□□□□□ -0.17
ATF1P18846 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.02□□□□□ -0.17
ATF1P18846 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.02□□□□□ -0.17
ATF1P18846 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.02□□□□□ -0.17
ATF1P18846 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.02□□□□□ -0.17
ATF1P18846 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ATF1P18846 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATF1P18846 AC010507.1-201ENST00000633895 436 ntBASIC14.02□□□□□ -0.17
ATF1P18846 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATF1P18846 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATF1P18846 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ATF1P18846 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATF1P18846 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ATF1P18846 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ATF1P18846 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.02□□□□□ -0.17
ATF1P18846 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATF1P18846 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ATF1P18846 AC232323.1-201ENST00000540724 2099 ntBASIC14.02□□□□□ -0.17
ATF1P18846 REXO1L5P-201ENST00000622260 2098 ntBASIC14.02□□□□□ -0.17
ATF1P18846 AC139749.1-202ENST00000617529 3139 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms