Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 UXT-AS1-201ENST00000590504 1525 ntBASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 ADH5P3-201ENST00000433842 1137 ntBASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AP000347.1-202ENST00000435868 847 ntBASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SPCS2P4-201ENST00000436160 681 ntBASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AC079140.1-201ENST00000508039 487 ntBASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV3-43DP0DP04 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC092384.3-202ENST00000564646 2873 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC142381.1-201ENST00000426099 345 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC004832.2-201ENST00000426397 482 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 HTR5BP-201ENST00000430851 1154 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AC024267.1-201ENST00000582320 895 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 MTDHP5-201ENST00000598980 586 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 C20orf181-201ENST00000623918 480 ntBASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms