Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 AKR1C7P-201ENST00000305623 895 ntBASIC17.62■□□□□ 0.41
TPM1P09493 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.62■□□□□ 0.41
TPM1P09493 KRT18P35-201ENST00000510488 1269 ntBASIC17.62■□□□□ 0.41
TPM1P09493 AF238378.1-201ENST00000526806 358 ntBASIC17.62■□□□□ 0.41
TPM1P09493 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.62■□□□□ 0.41
TPM1P09493 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 LINC01101-201ENST00000622953 1884 ntBASIC17.62■□□□□ 0.41
TPM1P09493 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TPM1P09493 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 RPS2P28-201ENST00000314255 741 ntBASIC17.61■□□□□ 0.41
TPM1P09493 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TPM1P09493 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.61■□□□□ 0.41
TPM1P09493 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.61■□□□□ 0.41
TPM1P09493 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 AC026748.1-201ENST00000624349 3251 ntBASIC17.61■□□□□ 0.41
TPM1P09493 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TPM1P09493 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM1P09493 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TPM1P09493 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM1P09493 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TPM1P09493 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TPM1P09493 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM1P09493 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.6■□□□□ 0.41
TPM1P09493 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TPM1P09493 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TPM1P09493 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TPM1P09493 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM1P09493 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms