Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 PMS2P2-201ENST00000425039 1128 ntBASIC16.12■□□□□ 0.17
HLA-DQB2P05538 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 SERBP1P3-201ENST00000459980 809 ntBASIC16.12■□□□□ 0.17
HLA-DQB2P05538 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 TARDBPP1-201ENST00000442013 1203 ntBASIC16.11■□□□□ 0.17
HLA-DQB2P05538 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 IGHV3-42-201ENST00000520410 361 ntBASIC16.11■□□□□ 0.17
HLA-DQB2P05538 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 AC010336.2-201ENST00000564226 506 ntBASIC16.11■□□□□ 0.17
HLA-DQB2P05538 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 MIR6069-201ENST00000620069 79 ntBASIC16.11■□□□□ 0.17
HLA-DQB2P05538 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB2P05538 AC100757.3-201ENST00000622361 1406 ntBASIC16.11■□□□□ 0.17
HLA-DQB2P05538 HYMAI-201ENST00000635591 3347 ntBASIC16.11■□□□□ 0.17
HLA-DQB2P05538 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms