Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 RN7SL589P-201ENST00000481268 310 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 KRT18P58-201ENST00000527480 1120 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AL135744.1-201ENST00000565098 629 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AC027307.2-201ENST00000591252 911 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AC099522.2-201ENST00000607001 744 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AP001282.1-201ENST00000531301 1499 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 AC008677.1-201ENST00000519230 1561 ntBASIC14.6□□□□□ -0.07
HIST1H2ABP04908 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H2ABP04908 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SPDYE11-202ENST00000450699 704 ntBASIC14.59□□□□□ -0.07
HIST1H2ABP04908 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 AL138918.1-201ENST00000568306 659 ntBASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SPDYE9P-201ENST00000570642 692 ntBASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SPDYE10P-202ENST00000612005 668 ntBASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SPDYE8P-202ENST00000612377 668 ntBASIC14.59□□□□□ -0.07
HIST1H2ABP04908 AC008267.7-201ENST00000624570 1194 ntBASIC14.59□□□□□ -0.07
HIST1H2ABP04908 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H2ABP04908 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H2ABP04908 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms