Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRGV3P03979 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC067863.1-201ENST00000494933 530 ntBASIC12.59□□□□□ -0.39
TRGV3P03979 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC105021.1-202ENST00000570572 669 ntBASIC12.59□□□□□ -0.39
TRGV3P03979 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC007967.4-201ENST00000614700 386 ntBASIC12.59□□□□□ -0.39
TRGV3P03979 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRGV3P03979 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRGV3P03979 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 TUBB3P1-201ENST00000405796 1332 ntBASIC12.59□□□□□ -0.39
TRGV3P03979 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 AP001282.1-201ENST00000531301 1499 ntBASIC12.59□□□□□ -0.39
TRGV3P03979 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRGV3P03979 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.58□□□□□ -0.39
TRGV3P03979 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRGV3P03979 AL035456.1-201ENST00000456064 1369 ntBASIC12.58□□□□□ -0.4
TRGV3P03979 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV3P03979 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TRGV3P03979 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV3P03979 AC092183.1-201ENST00000469884 875 ntBASIC12.58□□□□□ -0.4
TRGV3P03979 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 AC125807.1-201ENST00000483097 614 ntBASIC12.58□□□□□ -0.4
TRGV3P03979 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV3P03979 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV3P03979 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV3P03979 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TRGV3P03979 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV3P03979 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV3P03979 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV3P03979 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV3P03979 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRGV3P03979 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRGV3P03979 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV3P03979 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.57□□□□□ -0.4
TRGV3P03979 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms