Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CLN5O75503 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.11□□□□□ -0.31
CLN5O75503 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 TSPY19P-201ENST00000418461 509 ntBASIC13.11□□□□□ -0.31
CLN5O75503 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 TSPY18P-201ENST00000441642 509 ntBASIC13.11□□□□□ -0.31
CLN5O75503 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.11□□□□□ -0.31
CLN5O75503 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.11□□□□□ -0.31
CLN5O75503 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.11□□□□□ -0.31
CLN5O75503 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.11□□□□□ -0.31
CLN5O75503 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLN5O75503 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.11□□□□□ -0.31
CLN5O75503 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.11□□□□□ -0.31
CLN5O75503 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLN5O75503 PI4KAP1-204ENST00000612579 1703 ntBASIC13.1□□□□□ -0.31
CLN5O75503 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.1□□□□□ -0.31
CLN5O75503 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.1□□□□□ -0.31
CLN5O75503 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.1□□□□□ -0.31
CLN5O75503 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.1□□□□□ -0.31
CLN5O75503 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLN5O75503 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.1□□□□□ -0.31
CLN5O75503 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 AC087163.2-201ENST00000457299 853 ntBASIC13.1□□□□□ -0.31
CLN5O75503 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.1□□□□□ -0.31
CLN5O75503 PRELID1P1-202ENST00000567272 903 ntBASIC13.1□□□□□ -0.31
CLN5O75503 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 MPDU1-223ENST00000582151 728 ntBASIC13.1□□□□□ -0.31
CLN5O75503 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.1□□□□□ -0.31
CLN5O75503 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.1□□□□□ -0.31
CLN5O75503 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CLN5O75503 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.1□□□□□ -0.31
CLN5O75503 REXO1L6P-202ENST00000619970 1078 ntBASIC13.1□□□□□ -0.31
CLN5O75503 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CLN5O75503 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLN5O75503 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms