Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC026150.2-201ENST00000564693 1156 ntBASIC14.98□□□□□ -0.01
HCN1O60741 AC073389.1-201ENST00000595595 795 ntBASIC14.98□□□□□ -0.01
HCN1O60741 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 FAM45BP-202ENST00000592932 1624 ntBASIC14.98□□□□□ -0.01
HCN1O60741 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.97□□□□□ -0.01
HCN1O60741 TUBB3P1-201ENST00000405796 1332 ntBASIC14.97□□□□□ -0.01
HCN1O60741 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HCN1O60741 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.97□□□□□ -0.01
HCN1O60741 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.97□□□□□ -0.01
HCN1O60741 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.97□□□□□ -0.01
HCN1O60741 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 ALG1L8P-201ENST00000533887 760 ntBASIC14.97□□□□□ -0.01
HCN1O60741 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.97□□□□□ -0.01
HCN1O60741 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HCN1O60741 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.97□□□□□ -0.01
HCN1O60741 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.97□□□□□ -0.01
HCN1O60741 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.97□□□□□ -0.01
HCN1O60741 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCN1O60741 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.97□□□□□ -0.01
HCN1O60741 AC006058.4-201ENST00000624016 1670 ntBASIC14.97□□□□□ -0.01
HCN1O60741 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.96□□□□□ -0.01
HCN1O60741 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HCN1O60741 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HCN1O60741 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 SPDYE14P-201ENST00000442619 822 ntBASIC14.96□□□□□ -0.01
HCN1O60741 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.96□□□□□ -0.01
HCN1O60741 AC051619.7-201ENST00000568314 623 ntBASIC14.96□□□□□ -0.01
HCN1O60741 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.96□□□□□ -0.01
HCN1O60741 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCN1O60741 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.96□□□□□ -0.01
HCN1O60741 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.96□□□□□ -0.01
HCN1O60741 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.96□□□□□ -0.01
HCN1O60741 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
HCN1O60741 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HCN1O60741 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms