Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 AC093028.1-201ENST00000622998 982 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 KRT8P12-202ENST00000472924 1397 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 AL080243.2-201ENST00000418783 582 ntBASIC14.19□□□□□ -0.14
TRAF3IP2O43734 HIST3H2BA-201ENST00000436555 524 ntBASIC14.19□□□□□ -0.14
TRAF3IP2O43734 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 MIR4313-201ENST00000580760 101 ntBASIC14.19□□□□□ -0.14
TRAF3IP2O43734 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 AL589739.1-201ENST00000607720 493 ntBASIC14.19□□□□□ -0.14
TRAF3IP2O43734 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
TRAF3IP2O43734 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 TUBB3P1-201ENST00000405796 1332 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CICP13-201ENST00000422015 2789 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AC046158.3-201ENST00000624947 2558 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CETN4P-206ENST00000642099 2168 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 METTL21AP1-201ENST00000438852 635 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AC051619.7-201ENST00000568314 623 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AC097359.3-201ENST00000603982 1210 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms