Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CACNB4O00305 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CACNB4O00305 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CACNB4O00305 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CACNB4O00305 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CACNB4O00305 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CACNB4O00305 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
CACNB4O00305 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.71■□□□□ 0.11
CACNB4O00305 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CACNB4O00305 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.71■□□□□ 0.11
CACNB4O00305 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.71■□□□□ 0.11
CACNB4O00305 AC098614.1-201ENST00000368528 745 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.71■□□□□ 0.11
CACNB4O00305 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CACNB4O00305 AC023310.3-201ENST00000557027 670 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 AC100756.1-201ENST00000562736 682 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CACNB4O00305 AC138749.3-201ENST00000567691 622 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 AC099568.2-201ENST00000609194 695 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 AC116165.1-201ENST00000611806 668 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 AC007431.3-201ENST00000623221 587 ntBASIC15.71■□□□□ 0.11
CACNB4O00305 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.71■□□□□ 0.11
CACNB4O00305 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.71■□□□□ 0.11
CACNB4O00305 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CACNB4O00305 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.71■□□□□ 0.11
CACNB4O00305 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.71■□□□□ 0.11
CACNB4O00305 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CACNB4O00305 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.71■□□□□ 0.1
CACNB4O00305 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CACNB4O00305 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CACNB4O00305 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CACNB4O00305 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CACNB4O00305 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
CACNB4O00305 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.71■□□□□ 0.1
CACNB4O00305 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CACNB4O00305 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.71■□□□□ 0.1
CACNB4O00305 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 AC068587.6-202ENST00000641839 5619 ntBASIC15.7■□□□□ 0.1
CACNB4O00305 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CACNB4O00305 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 AL596087.1-201ENST00000400979 1969 ntBASIC15.7■□□□□ 0.1
CACNB4O00305 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.7■□□□□ 0.1
CACNB4O00305 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.7■□□□□ 0.1
CACNB4O00305 GAPDHP21-201ENST00000450301 1010 ntBASIC15.7■□□□□ 0.1
CACNB4O00305 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.7■□□□□ 0.1
CACNB4O00305 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.7■□□□□ 0.1
CACNB4O00305 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.7■□□□□ 0.1
CACNB4O00305 RRP7BP-205ENST00000566851 833 ntBASIC15.7■□□□□ 0.1
CACNB4O00305 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.7■□□□□ 0.1
CACNB4O00305 AC008494.3-201ENST00000606615 944 ntBASIC15.7■□□□□ 0.1
CACNB4O00305 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.7■□□□□ 0.1
CACNB4O00305 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.7■□□□□ 0.1
CACNB4O00305 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.7■□□□□ 0.1
CACNB4O00305 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CACNB4O00305 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CACNB4O00305 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms