Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.12■□□□□ 0.17
AP3B1O00203 AL645939.2-201ENST00000427340 991 ntBASIC16.12■□□□□ 0.17
AP3B1O00203 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.12■□□□□ 0.17
AP3B1O00203 CEND1P1-201ENST00000451006 455 ntBASIC16.12■□□□□ 0.17
AP3B1O00203 AC069335.1-201ENST00000489972 472 ntBASIC16.12■□□□□ 0.17
AP3B1O00203 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.12■□□□□ 0.17
AP3B1O00203 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.12■□□□□ 0.17
AP3B1O00203 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
AP3B1O00203 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.12■□□□□ 0.17
AP3B1O00203 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
AP3B1O00203 AC105339.1-204ENST00000636249 355 ntBASIC16.12■□□□□ 0.17
AP3B1O00203 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.12■□□□□ 0.17
AP3B1O00203 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
AP3B1O00203 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.11■□□□□ 0.17
AP3B1O00203 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP3B1O00203 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3B1O00203 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3B1O00203 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3B1O00203 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3B1O00203 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.11■□□□□ 0.17
AP3B1O00203 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.11■□□□□ 0.17
AP3B1O00203 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.11■□□□□ 0.17
AP3B1O00203 AC006058.4-201ENST00000624016 1670 ntBASIC16.11■□□□□ 0.17
AP3B1O00203 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP3B1O00203 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.1■□□□□ 0.17
AP3B1O00203 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
AP3B1O00203 AC005237.2-201ENST00000434368 219 ntBASIC16.1■□□□□ 0.17
AP3B1O00203 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms