Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 AP002383.4-201ENST00000442518 975 ntBASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 LINC00265-3P-201ENST00000447588 903 ntBASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TSSC2-201ENST00000450217 709 ntBASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC015656.1-201ENST00000624209 3578 ntBASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 MIR5100-201ENST00000579544 119 ntBASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AP002414.4-201ENST00000589764 1148 ntBASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC092329.2-201ENST00000598402 547 ntBASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RCL1Q9Y2P8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms