Protein–RNA interactions for Protein: Q9UPQ9

TNRC6B, Trinucleotide repeat-containing gene 6B protein, humanhuman

Known RBP Predictions only

Length 1,833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6BQ9UPQ9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 FTLP1-201ENST00000449155 526 ntBASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 RN7SL769P-201ENST00000469386 295 ntBASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 AC100850.1-201ENST00000506768 649 ntBASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 MIR4783-201ENST00000580343 82 ntBASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 AC128714.1-201ENST00000637035 887 ntBASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC6BQ9UPQ9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 AL158070.2-201ENST00000623713 1621 ntBASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 CD8B2-202ENST00000417670 633 ntBASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TNRC6BQ9UPQ9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 NUP210P1-202ENST00000504322 710 ntBASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 FTLP10-202ENST00000505798 471 ntBASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AC026740.1-201ENST00000607068 791 ntBASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AF254983.2-201ENST00000612331 135 ntBASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 MIR6727-201ENST00000620702 65 ntBASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AC092171.3-201ENST00000610122 2651 ntBASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNRC6BQ9UPQ9 AC091046.1-201ENST00000331871 207 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms