Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.68□□□□□ -0.22
GCM1Q9NP62 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC107890.1-201ENST00000422478 521 ntBASIC13.68□□□□□ -0.22
GCM1Q9NP62 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC105021.1-202ENST00000570572 669 ntBASIC13.68□□□□□ -0.22
GCM1Q9NP62 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC026979.3-201ENST00000607315 403 ntBASIC13.68□□□□□ -0.22
GCM1Q9NP62 AL596087.1-201ENST00000400979 1969 ntBASIC13.68□□□□□ -0.22
GCM1Q9NP62 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 AC093512.1-201ENST00000617969 520 ntBASIC13.67□□□□□ -0.22
GCM1Q9NP62 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms