Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 RNU1-129P-201ENST00000384064 167 ntBASIC15.32■□□□□ 0.04
PIF1Q9H611 MRPL20P1-201ENST00000400819 433 ntBASIC15.32■□□□□ 0.04
PIF1Q9H611 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.32■□□□□ 0.04
PIF1Q9H611 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.32■□□□□ 0.04
PIF1Q9H611 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 U1.21-201ENST00000580816 167 ntBASIC15.32■□□□□ 0.04
PIF1Q9H611 AL031055.1-201ENST00000606362 631 ntBASIC15.32■□□□□ 0.04
PIF1Q9H611 AC021097.1-201ENST00000607902 574 ntBASIC15.32■□□□□ 0.04
PIF1Q9H611 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PIF1Q9H611 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.32■□□□□ 0.04
PIF1Q9H611 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PIF1Q9H611 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.32■□□□□ 0.04
PIF1Q9H611 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
PIF1Q9H611 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PIF1Q9H611 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 CICP24-201ENST00000605464 2705 ntBASIC15.31■□□□□ 0.04
PIF1Q9H611 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.31■□□□□ 0.04
PIF1Q9H611 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.31■□□□□ 0.04
PIF1Q9H611 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.31■□□□□ 0.04
PIF1Q9H611 AL356488.2-201ENST00000602755 427 ntBASIC15.31■□□□□ 0.04
PIF1Q9H611 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 SBF1P1-201ENST00000444527 5631 ntBASIC15.31■□□□□ 0.04
PIF1Q9H611 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.31■□□□□ 0.04
PIF1Q9H611 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 AC099063.4-201ENST00000641099 1602 ntBASIC15.31■□□□□ 0.04
PIF1Q9H611 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PIF1Q9H611 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PIF1Q9H611 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.31■□□□□ 0.04
PIF1Q9H611 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.3■□□□□ 0.04
PIF1Q9H611 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.3■□□□□ 0.04
PIF1Q9H611 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PIF1Q9H611 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PIF1Q9H611 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms