Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AP005117.1-202ENST00000581724 1908 ntBASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC68Q9H2F9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AC008677.1-201ENST00000519230 1561 ntBASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AP001282.1-201ENST00000531301 1499 ntBASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 MKNK2P1-201ENST00000437526 628 ntBASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 TIMM8BP1-201ENST00000452384 211 ntBASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PGAM5P1-201ENST00000518923 814 ntBASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.06■□□□□ 0.16
CCDC68Q9H2F9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms