Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 TIMM10B-203ENST00000530751 809 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 COMMD9-206ENST00000532705 881 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 SRR-208ENST00000576848 588 ntTSL 4 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC002116.2-201ENST00000586962 643 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC120498.8-201ENST00000614275 531 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC243830.3-201ENST00000616810 376 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC00710-218ENST00000634614 1166 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 BID-204ENST00000399767 2129 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL162741.1-201ENST00000565563 1558 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC004585.2-201ENST00000624090 1473 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 PAN3-AS1-201ENST00000563843 1351 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SNORA27.3-201ENST00000364937 134 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC022080.1-201ENST00000366255 781 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 RNU6-152P-201ENST00000384037 107 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 Y_RNA.450-201ENST00000384198 113 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SNORD116-12-201ENST00000384468 92 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 RNU6-847P-201ENST00000411115 108 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 OR51N1P-201ENST00000433299 952 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 MYCNUT-201ENST00000433810 1039 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL161937.2-202ENST00000435301 733 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 YWHAZP7-201ENST00000436906 631 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL513321.1-201ENST00000441175 761 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 DTNBP1-204ENST00000462989 1010 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 THOC7-204ENST00000469584 836 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 MRPS28-208ENST00000521605 437 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 LETM2-213ENST00000527710 1261 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 OR4A12P-201ENST00000530847 918 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 OR4A21P-201ENST00000532759 944 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC004817.2-201ENST00000561794 651 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC009063.1-201ENST00000563342 702 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC096708.2-201ENST00000577676 512 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC011466.2-201ENST00000594589 359 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC026304.1-201ENST00000597953 561 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC093788.1-201ENST00000609356 927 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL732292.2-201ENST00000609649 430 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL353726.1-201ENST00000614041 1000 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SAMMSON-227ENST00000642114 1199 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms