Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 WASH6P-202ENST00000359512 1437 ntBASIC14.33□□□□□ -0.11
TRAF4Q9BUZ4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF4Q9BUZ4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF4Q9BUZ4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TRAF4Q9BUZ4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 AC087641.1-201ENST00000557561 1021 ntBASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 MIR3909-201ENST00000579518 119 ntBASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 AL031055.1-201ENST00000606362 631 ntBASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 AP001350.2-201ENST00000625104 1094 ntBASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 SLC22A20-204ENST00000530038 1673 ntBASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF4Q9BUZ4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 GPS2P2-201ENST00000430745 888 ntBASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 RBPMS2P1-201ENST00000437762 623 ntBASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 LINC01225-203ENST00000563550 1244 ntBASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF4Q9BUZ4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAF4Q9BUZ4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF4Q9BUZ4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF4Q9BUZ4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF4Q9BUZ4 UXT-AS1-201ENST00000590504 1525 ntBASIC14.31□□□□□ -0.12
TRAF4Q9BUZ4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms