Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 KRT126P-201ENST00000549467 1181 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AL160237.2-201ENST00000556165 472 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CYGB-205ENST00000590175 830 ntTSL 3 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 HARS-204ENST00000438307 1789 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 GPAA1P2-202ENST00000606848 1787 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CYP51A1P2-201ENST00000419457 1499 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AP002414.3-201ENST00000589352 1468 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AC092171.3-201ENST00000610122 2651 ntBASIC9.59□□□□□ -0.88
LIMD2Q9BT23 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 HARS-203ENST00000431330 1774 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ME2P1-201ENST00000426028 1970 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 PMS2P1-201ENST00000431037 1228 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AC098831.1-202ENST00000438821 336 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 UNC93B7-201ENST00000509439 705 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AL031055.1-201ENST00000606362 631 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AL031008.1-201ENST00000619963 541 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 AC004790.2-201ENST00000623588 572 ntBASIC9.58□□□□□ -0.88
LIMD2Q9BT23 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms