Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 ELK1P1-201ENST00000485699 580 ntBASIC18.51■□□□□ 0.55
SLF1Q9BQI6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 RRP7BP-205ENST00000566851 833 ntBASIC18.51■□□□□ 0.55
SLF1Q9BQI6 AC132938.2-201ENST00000579188 680 ntBASIC18.51■□□□□ 0.55
SLF1Q9BQI6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 AL591163.1-201ENST00000641757 987 ntBASIC18.51■□□□□ 0.55
SLF1Q9BQI6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 BNIP3P1-202ENST00000550043 1585 ntBASIC18.51■□□□□ 0.55
SLF1Q9BQI6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLF1Q9BQI6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC098850.1-201ENST00000419919 790 ntBASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 CTBP2P3-201ENST00000585629 1255 ntBASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 LINC01115-203ENST00000606068 577 ntBASIC18.5■□□□□ 0.55
SLF1Q9BQI6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.5■□□□□ 0.55
SLF1Q9BQI6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 RARRES2P5-201ENST00000564013 466 ntBASIC18.49■□□□□ 0.55
SLF1Q9BQI6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLF1Q9BQI6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms