Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 CEND1P1-201ENST00000451006 455 ntBASIC15.68■□□□□ 0.1
NPAS2Q99743 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NPAS2Q99743 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.68■□□□□ 0.1
NPAS2Q99743 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NPAS2Q99743 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 AC008677.1-201ENST00000519230 1561 ntBASIC15.67■□□□□ 0.1
NPAS2Q99743 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.67■□□□□ 0.1
NPAS2Q99743 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.67■□□□□ 0.1
NPAS2Q99743 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.67■□□□□ 0.1
NPAS2Q99743 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.67■□□□□ 0.1
NPAS2Q99743 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.67■□□□□ 0.1
NPAS2Q99743 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 AL009178.2-201ENST00000597278 2719 ntBASIC15.67■□□□□ 0.1
NPAS2Q99743 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.67■□□□□ 0.1
NPAS2Q99743 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
NPAS2Q99743 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.67■□□□□ 0.1
NPAS2Q99743 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NPAS2Q99743 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NPAS2Q99743 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPAS2Q99743 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NPAS2Q99743 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS2Q99743 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS2Q99743 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS2Q99743 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS2Q99743 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS2Q99743 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS2Q99743 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.66■□□□□ 0.1
NPAS2Q99743 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.66■□□□□ 0.1
NPAS2Q99743 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 AC079781.4-201ENST00000641908 219 ntBASIC15.66■□□□□ 0.1
NPAS2Q99743 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS2Q99743 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms