Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCL13Q99616 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL13Q99616 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL13Q99616 CYMP-203ENST00000474680 1263 ntBASIC13.37□□□□□ -0.27
CCL13Q99616 HLA-V-204ENST00000476601 1289 ntBASIC13.37□□□□□ -0.27
CCL13Q99616 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.37□□□□□ -0.27
CCL13Q99616 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL13Q99616 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL13Q99616 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCL13Q99616 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL13Q99616 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCL13Q99616 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL13Q99616 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL13Q99616 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
CCL13Q99616 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL13Q99616 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 REXO1L1P-202ENST00000608646 1974 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 KRT8P12-202ENST00000472924 1397 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL13Q99616 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 SPDYE17-201ENST00000412399 783 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 AC092580.3-201ENST00000430932 139 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 AC055876.3-201ENST00000431496 288 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL13Q99616 AL158211.3-201ENST00000607385 239 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 AC138649.4-201ENST00000612222 287 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 AL390754.1-201ENST00000619088 582 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 AC011477.6-201ENST00000604980 1927 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CCL13Q99616 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 AC018892.3-201ENST00000623986 2499 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL13Q99616 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CCL13Q99616 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 HYMAI-201ENST00000635591 3347 ntBASIC13.36□□□□□ -0.27
CCL13Q99616 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL13Q99616 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL13Q99616 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms